Preview

Real-World Data & Evidence

Advanced search

Implementation of microbiological monitoring for predicting the multidrug-resistant phenotype of respiratory isolates based on risk factor analysis in patients with community-acquired pneumonia

https://doi.org/10.37489/2782-3784-myrwd-074

EDN: FUCCBB

Abstract

   Relevance. Studying risk factors for the presence of multidrug-resistant pathogens at the regional level, which predetermine multiple resistance, is an important component for personalizing the applied strategies of empirical antimicrobial therapy within the framework of epidemiological safety.

   Objective. To study and analyze factors of polyresistance to optimize the choice of empirical antimicrobial therapy in patients with community-acquired pneumonia at the regional level.

   Materials and methods. Clinical, microbiological and molecular genetic risk factors for the presence of multidrug-resistant pathogens of regional significance were retrospectively assessed in 533 patients with community-acquired pneumonia of inpatient profile. To predict the impact of risk factors on the multidrug resistance of respiratory isolates at the regional level, the method of constructing ROC curves was used.

   Results. The leading respiratory isolates in the etiology of community-acquired pneumonia at the regional level were determined. A high level of associative resistance was demonstrated in respiratory isolates of Klebsiella pneumonia, Haemophylus influenzae, Escherichia coli, requiring mandatory microbiological and molecular genetic testing to select initial antimicrobial therapy. Frequency of carbapenemase production in the leading etiologically significant microorganism Klebsiella pneumonia was 60 %; the presence of multiple resistance mechanisms was 30 %, the presence of metallo-beta-lactamases of the NDM type was 42 %, respectively. In the constructed forecasting models, the following factors became practically significant for the implementation of polyresistance at the regional level: previous hospitalization and antimicrobial therapy, stay in long-term care facilities, prior treatment with carbapenem antibiotics, and associative production of carbapenemase with extended spectrum beta-lactamases.

   Conclusion. The obtained results demonstrate the importance of a comprehensive analysis of clinical and microbiological factors for predicting the polyresistance phenotype in a specific medical organization and optimizing the empirical choice of antimicrobial drugs.

About the Authors

O. P. Bobrova
Federal Siberian Scientific and Clinical Center of the Federal Medical and Biological Agency; Krasnoyarsk State Medical University named after prof. V.F. Voino-Yasenetsky
Russian Federation

Olga P. Bobrova, Dr. Sci. (Med.), Associate Professor, Associate Professor of the Department, Head of the Department, physician — clinical pharmacologist 

Department of Pharmacology and Clinical Pharmacology with a course of professional development; Department of Clinical Pharmacology

Krasnoyarsk


Competing Interests:

The author declares no conflict of interest



S. K. Zyryanov
Peoples' Friendship University of Russia named after Patrice Lumumba; City Clinical Hospital No. 24 of the Moscow Health Department
Russian Federation

Sergey K. Zyryanov, Dr. Sci. (Med.), Professor, Head of the Department, Deputy Chief Physician for Medical Affairs (Therapy) 

Department of General and Clinical Pharmacology

Moscow


Competing Interests:

The author declares no conflict of interest



V. V. Chernaya
Federal Siberian Scientific and Clinical Center of the Federal Medical and Biological Agency
Russian Federation

Vita V. Chernaya, physician — bacteriologist

Krasnoyarsk


Competing Interests:

The author declares no conflict of interest



M. V. Statsenko
Federal Siberian Scientific and Clinical Center of the Federal Medical and Biological Agency
Russian Federation

Marina V. Statsenko, Acting Head of the Laboratory, Biologist

Krasnoyarsk


Competing Interests:

The author declares no conflict of interest



O. A. Parygina
Federal Siberian Scientific and Clinical Center of the Federal Medical and Biological Agency
Russian Federation

Olga A. Parygina, Head of the laboratory

PCR laboratory

Krasnoyarsk


Competing Interests:

The author declares no conflict of interest



References

1. Kozlov R.S., Murav'ev A.A., Chagaryan A.N., Ivanchik N.V., Kurkova A.A., Kuz'menkov A.YU., Trushin I.V., Sukhorukova M.V., Cvetkova I.A., Morozova O.A., Kirillova G.SH., Popova L.D., Moskvitina E.N., Petrova T.A., Mart'yanova N.M., Ershova M.G., Bykonya S.A. Ehpidemiologiya i antibiotikorezistentnost' serotipov S. pneumoniae, cirkuliruyushchikh vo vzrosloj populyacii na territorii Rossijskoj Federacii (issledovanie «SPECTRUM»). Klinicheskaya mikrobiologiya i antimikrobnaya khimioterapiya. 2021;23 (2):127-137. doi: 10.36488/cmac.2021.2.127-137. (In Russ.).

2. Rachina S.A., Kupryushina O.A., Strelkova D.A., Avdeev S.N., Vlasenko A.E., Yasneva A.S., Yudanova T.A., Trofimenko I.N., Antonov V.N., Agibalova M.N., Merzhoeva Z.M., Yacyshina S.B., Tikhonova M.A., El'kina M.A., Ananicheva N.A., Burmistrova E.N., Sukhorukova M.V. Ehtiologiya vnebol'nichnoj pnevmonii u vzroslykh v stacionarakh RF posle pandemii COVID-19: rezul'taty mnogocentrovogo prospektivnogo issledovaniya. Klinicheskaya mikrobiologiya i antimikrobnaya khimioterapiya. 2024;26(2):141-147 doi: 10.36488/cmac.2024.2.141-147. (In Russ.).

3. Klinicheskie rekomendacii Vnebol'nichnaya pnevmoniya u vzroslykh 2024g. [Russian clinical guidelines]. https://cr.minzdrav.gov.ru/.

4. Villafuerte D., Aliberti S., Soni N.J., Faverio P., Marcos P.J., Wunderink R.G., Rodriguez A., Sibila O., Sanz F., Martin-Loeches I., Menzella F., Reyes L.F., Jankovic M., Spielmanns M., Restrepo M.I. GLIMP Investigators. Prevalence and risk factors for Enterobacteriaceae in patients hospitalized with community-acquired pneumonia. Respirology. 2020;25(5):543-551. doi: 10.1111/resp.13663.

5. Aston S.J., Wootton D.G. Community-acquired pneumonia due to drug-resistant Enterobacteriaceae: A global perspective. Respirology. 2020;25(5):468-469. doi: 10.1111/resp.13720.

6. Aliberti S, Dela Cruz CS, Amati F, Sotgiu G, Restrepo MI. Community-acquired pneumonia. Lancet. 202;398 (10303):906-919. doi: 10.1016/S0140-6736(21)00630-9.

7. Pusparajah P., Letchumanan V., Goh B.H., McGaw L.J. Editorial: Novel approaches to the treatment of multidrug-resistant bacteria, Volume II. Front Pharmacol. 2020;13:1090618. doi: 10.3389/fphar.2022.1090618.

8. Shen L., Wang L., Liu C., Shi S., Takahashi T., Wang T. Community-acquired pneumonia: Trends in and research on drug resistance and advances in new antibiotics. Biosci Trends. 2021;15(5): 266–275. doi: 10.5582/bst.2021.01342.

9. Nakagawa N., Katsurada M., Fukuda Y., Noguchi S., Horita N., Miki M., Tsukada H., Senda K., Shindo Y., Mukae H. Risk factors for drug-resistant pathogens in community-acquired pneumonia : systematic review and meta-analysis. Eur Respir Rev. 2025;34(175):240183. doi: 10.1183/16000617.0183–2024.

10. Liapikou A., Cilloniz C., Palomeque A., Torres T. Emerging antibiotics for community-acquired pneumonia. Expert Opin Emerg Drugs. 2019;24 (4):221–231. doi: 10.1080/14728214.2019.1685494.

11. «Opredelenie chuvstvitel'nosti mikroorganizmov k antimikrobnym preparataM» 2024 g. https://www.antibiotic.ru /library / ocmap2024 / (Russian clinical guidelines)

12. Magiorakos A.P., Srinivasan A., Carey R.B., Carmeli Y., Falagas M.E., Giske C.G., Harbarth S., Hindler J.F., Kahlmeter G., Olsson-Liljequist B., Paterson D.L., Rice L.B., Stelling J., Struelens M.J., Vatopoulos A., Weber J.T., Monnet D.L. Multidrug-resistant, extensively drug-resistant and pandrug-resistant bacteria: an international expert proposal for interim standard definitions for acquired resistance. Clin Microbiol Infect. 2012;18(3):268-81. doi: 10.1111/j.1469-0691.2011.03570.x.

13. El'kina M.A., Yacyshina S.B., Tronza T.V., Rachina S.A., Spichak T.V., Akimkin V.G. Ehffektivnost' molekulyarno-geneticheskikh metodov diagnostiki infekcij, vyzvannykh S. pneumoniae i H. influenzae. Ehpidemiologiya i infekcionnye bolezni. Aktual'nye voprosy. 2023; 13(2):56–62. doi: 10.18565/epidem.2023.13.2.56-62. (In Russ.).

14. Cyganko D. V., Berdnikova N. G., Krasnykh L. M. i dr. Nekotorye kliniko-farmakologicheskie aspekty terapii vnebol'nichnoj pnevmonii. Ehffektivnaya farmakoterapiya. 2019; 15 (27):28–36. doi 10.33978/2307-3586-2019-15-27-28-36. (In Russ.).

15. Amati F., Bindo F., Stainer A., Gramegna A., Mantero M., Nigro M., Bussini L., Bartoletti M., Blasi F., Aliberti S. Identify Drug-Resistant Pathogens in Patients with Community-Acquired Pneumonia. Adv Respir Med. 2023;91(3):224-238. doi: 10.3390/arm91030018.

16. Beloborodov V.B., Goloshchapov O.V., Gusarov V.G., Dekhnich A.V., Zamyatin M.N., Zolotukhin K.N., Zubareva N.A., Zyryanov S.K., Kamyshova D.A., Klimko N.N., Kozlov R.S., Kulabukhov V.V., Matinyan N.V., Petrushin M.A., Polushin YU.S., Popov D.A., Pyregov A.V., Rudnov V.A., Sidorenko S.V., Sokolov D.V., Sychev I.N., Shlyk I.V., Ehjdel'shtejn M.V., Yakovlev S.V. Diagnostika i antimikrobnaya terapiya infekcij, vyzvannykh polirezistentnymi mikroorganizmamI» (obnovlenie 2024 goda). Vestnik anesteziologii i reanimatologii. 2025;22(2):149-189. doi: 10.24884/2078-5658-2025-22-2-149-189. (In Russ.).

17. Programma SKAT (strategiya kontrolya antimikrobnoj terapii) pri okazanii stacionarnoj medicinskoj pomoshchi 2018g. https://antimicrob.net/about//(Russian clinical guidelines)

18. Chen G., Xu K., Sun F., Sun Y., Kong Z., Fang B. Risk Factors of Multidrug-Resistant Bacteria in Lower Respiratory Tract Infections : A Systematic Review and Meta-Analysis. Can J Infect Dis Med Microbiol. 2020;2020:7268519. doi: 10.1155/2020/7268519.

19. Ukai T., Maruyama T., Tomioka S., Fukui T., Matsuda S., Fushimi K., Iso H. Predictors of hospital mortality and multidrug-resistant pathogens in hospitalized pneumonia patients residing in the community. Heliyon. 2023 Nov 15;9(12):e22303. doi: 10.1016/j.heliyon.2023.e22303.

20. Covington E.W., Rufe A. Identification of risk factors for multidrug-resistant organisms in community-acquired bacterial pneumonia at a community hospital. J Pharm Pract. 2023;36: 303–308. doi: 10.1177/08971900211039700.

21. Ageevec V.A., Ageevec I.V., Sidorenko S.V. Konvergenciya mnozhestvennoj rezistentnosti i gipervirulentnosti u Klebsiella pneumoniae. Infekciya i immunitet. 2022;12(3):450-460. doi: 10.15789/2220-7619-COM-1825. (In Russ.).

22. Barreto JV, Dias CC, Cardoso T. Risk factors for community-onset pneumonia caused by drug-resistant pathogens: A prospective cohort study. Eur J Intern Med. 2022;96:66-73. doi: 10.1016/j.ejim.2021.10.005.

23. Fally M., Hansel J., Robey R.C., Haseeb F., Kouta A., Williams T., Felton T., Mathioudakis A.G. Decoding community-acquired pneumonia : a systematic review and analysis of diagnostic criteria and definitions used in clinical trials. Clin Microbiol Infect. 2025;31(5):724-730. doi: 10.1016/j.cmi.2024.12.028.

24. Leo F, Stegemann M.S., Maurer F. Antibiotic Stewardship bei ambulant erworbener Pneumonie [Antibiotic Stewardship in Community-Acquired Pneumonia]. Dtsch Med Wochenschr. 2020;145(6):383-392. doi: 10.1055/a-0993-1164.

25. Ehjdel'shtejn M.V., Shajdullina EH.R., Ivanchik N.V., Dekhnich A.V., Mikotina A.V., Skleenova E.Yu., Sukhorukova M.V., Azizov I.S., Shek E.A., Romanov A.V., Trushin I.S., Kuz'menkov A.Yu., Kozlov R.S. Antibiotikorezistentnost' klinicheskikh izolyatov Klebsiella pneumoniae i Escherichia coli v stacionarakh Rossii: rezul'taty mnogocentrovogo ehpidemiologicheskogo issledovaniya. Klinicheskaya mikrobiologiya i antimikrobnaya khimioterapiya. 2024; 26(1):67-78. doi: 10.36488/cmac.2024.1.67-78. (In Russ.).

26. Sando E., Suzuki M., Ishida M., Yaegashi M., Aoshima M., Ariyoshi K., Morimoto K. Definitive and Indeterminate Pseudomonas aeruginosa Infection in Adults with Community-acquired Pneumonia: A Prospective Observational Study. Ann Am Thorac Soc. 2021;18(9):1475-1481. doi: 10.1513/AnnalsATS.201906-459OC.


Review

For citations:


Bobrova O.P., Zyryanov S.K., Chernaya V.V., Statsenko M.V., Parygina O.A. Implementation of microbiological monitoring for predicting the multidrug-resistant phenotype of respiratory isolates based on risk factor analysis in patients with community-acquired pneumonia. Real-World Data & Evidence. 2025;5(2):58-71. (In Russ.) https://doi.org/10.37489/2782-3784-myrwd-074. EDN: FUCCBB

Views: 65


Creative Commons License
This work is licensed under a Creative Commons Attribution 4.0 License.


ISSN 2782-3784 (Online)